Objective and summary:
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DNA extractions of juvenile A. irradians from October 25th 2021; objective is to use these extractions for lcWGS sequencing for GWAS, SNP calling, etc. alonside the parentage of F0s extracted for the same seq
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an online checklist can be found [here]{https://docs.google.com/spreadsheets/d/1RHM3u-njPWcJWpEaOIGDrHUU3swhVPZvZRTKvVuSV1Q/edit?usp=drive_web&ouid=108372819286763574086}
Qubit Results (dsDNA BR assay kit)
- NOTE: has several issues running the standards for the dsDNA BR assay kit (was a little rusty I guess) I opened a fresh 500 assay kit to diagnose this error and concluded that the reagent (or dye) must be thawed nearly completely and perhaps vortexed/spun down to receive a workable sample w/o error downstream - in summary the ‘old’ kit opened in January 2021 should still work fine
| Sample | DNA (ng/uL) | |
|---|---|---|
| RUN 1 | RUN 2 | |
| Standard | 43.21 | |
| Standard | 3137.81 | |
| 1 | 164 | |
| 2 | 227 | |
| 51 | 116 | |
| 52 | 276 | |
| 101 | 152 | |
| 102 | 223 | |
| 151 | 244 | |
| 152 | 127 | |
| 201 | 103 | |
| 202 | 298 | |
| 251 | 228 | |
| 252 | 299 |