Argopecten Qubit 20220531

Objective and summary:

  • DNA extractions of juvenile A. irradians from October 25th 2021; objective is to use these extractions for lcWGS sequencing for GWAS, SNP calling, etc. alonside the parentage of F0s extracted for the same seq

  • an online checklist can be found [here]{https://docs.google.com/spreadsheets/d/1RHM3u-njPWcJWpEaOIGDrHUU3swhVPZvZRTKvVuSV1Q/edit?usp=drive_web&ouid=108372819286763574086}

Qubit Results (dsDNA BR assay kit)

  • NOTE: has several issues running the standards for the dsDNA BR assay kit (was a little rusty I guess) I opened a fresh 500 assay kit to diagnose this error and concluded that the reagent (or dye) must be thawed nearly completely and perhaps vortexed/spun down to receive a workable sample w/o error downstream - in summary the ‘old’ kit opened in January 2021 should still work fine

Sample DNA (ng/uL)  
  RUN 1 RUN 2
Standard 43.21  
Standard 3137.81  
1 164  
2 227  
51 116  
52 276  
101 152  
102 223  
151 244  
152 127  
201 103  
202 298  
251 228  
252 299